Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Alx1Q8C8B0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Alx1Q8C8B0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Alx1Q8C8B0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Alx1Q8C8B0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Gm9794-201ENSMUST00000202370 423 ntBASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.08■□□□□ 0.16
Alx1Q8C8B0 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Alx1Q8C8B0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.07■□□□□ 0.16
Alx1Q8C8B0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Gm12490-201ENSMUST00000120255 560 ntBASIC16.07■□□□□ 0.16
Alx1Q8C8B0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Gm12091-201ENSMUST00000146791 830 ntBASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Gm6745-201ENSMUST00000199216 526 ntBASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Gm45384-201ENSMUST00000210451 277 ntBASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Alx1Q8C8B0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Alx1Q8C8B0 Gm28911-201ENSMUST00000188837 117 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms