Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Usp44Q8C2S0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Matn2-206ENSMUST00000228570 2798 ntBASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Usp44Q8C2S0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Usp44Q8C2S0 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Gm15376-201ENSMUST00000122258 783 ntBASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Gm19078-201ENSMUST00000206311 727 ntBASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.14■□□□□ 0.17
Usp44Q8C2S0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Gm24447-201ENSMUST00000083977 338 ntBASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Usp44Q8C2S0 Syt7-205ENSMUST00000224135 1557 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms