Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trub1Q8C0D0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trub1Q8C0D0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Acot6-202ENSMUST00000222921 3622 ntBASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Gm6912-201ENSMUST00000117218 544 ntBASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trub1Q8C0D0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.24□□□□□ -0.13
Trub1Q8C0D0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms