Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Gm12341-201ENSMUST00000119724 503 ntBASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Gm14928-201ENSMUST00000120198 477 ntBASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.14□□□□□ -0.15
Nup54Q8BTS4 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup54Q8BTS4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Gm11524-201ENSMUST00000119349 807 ntBASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.13□□□□□ -0.15
Nup54Q8BTS4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.13□□□□□ -0.15
Nup54Q8BTS4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Gm18018-201ENSMUST00000198273 408 ntBASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nup54Q8BTS4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nup54Q8BTS4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms