Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cpne3Q8BT60 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Gm14822-201ENSMUST00000122247 291 ntBASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Gm44335-201ENSMUST00000196879 141 ntBASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Gm44297-201ENSMUST00000198304 141 ntBASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Gm44346-201ENSMUST00000198851 141 ntBASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Gm44608-201ENSMUST00000206827 855 ntBASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpne3Q8BT60 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.36□□□□□ -0.27
Cpne3Q8BT60 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.36□□□□□ -0.27
Cpne3Q8BT60 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpne3Q8BT60 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne3Q8BT60 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne3Q8BT60 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne3Q8BT60 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Cpne3Q8BT60 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne3Q8BT60 BC001981-202ENSMUST00000191393 1545 ntBASIC13.35□□□□□ -0.27
Cpne3Q8BT60 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpne3Q8BT60 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms