Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab11fip4Q8BQP8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab11fip4Q8BQP8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Rab11fip4Q8BQP8 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab11fip4Q8BQP8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rab11fip4Q8BQP8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.35■□□□□ 0.05
Rab11fip4Q8BQP8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rab11fip4Q8BQP8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Gm43703-201ENSMUST00000200523 763 ntBASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Gm9229-201ENSMUST00000222777 126 ntBASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rab11fip4Q8BQP8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.05
Rab11fip4Q8BQP8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
Rab11fip4Q8BQP8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rab11fip4Q8BQP8 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Rab11fip4Q8BQP8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Rab11fip4Q8BQP8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Gm6218-201ENSMUST00000219812 628 ntBASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Mir125a-201ENSMUST00000083545 68 ntBASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.33■□□□□ 0.04
Rab11fip4Q8BQP8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Gm12859-201ENSMUST00000117834 427 ntBASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 AA619741-201ENSMUST00000195095 646 ntBASIC15.32■□□□□ 0.04
Rab11fip4Q8BQP8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms