Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Rprl2-201ENSMUST00000157150 290 ntBASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Gm6736-201ENSMUST00000166583 948 ntBASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Gm27702-201ENSMUST00000184512 56 ntBASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf38Q8BI21 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Gm13365-201ENSMUST00000121188 973 ntBASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf38Q8BI21 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Gm2445-201ENSMUST00000182798 989 ntBASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Gm27631-201ENSMUST00000184163 466 ntBASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf38Q8BI21 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms