Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rif1Q6PR54 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.63□□□□□ -0.55
Rif1Q6PR54 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rif1Q6PR54 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Gm7666-201ENSMUST00000146631 819 ntBASIC11.62□□□□□ -0.55
Rif1Q6PR54 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Gm28324-201ENSMUST00000187913 264 ntBASIC11.62□□□□□ -0.55
Rif1Q6PR54 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.62□□□□□ -0.55
Rif1Q6PR54 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.62□□□□□ -0.55
Rif1Q6PR54 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rif1Q6PR54 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rif1Q6PR54 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Gm43548-201ENSMUST00000197139 2353 ntBASIC11.61□□□□□ -0.55
Rif1Q6PR54 Gm14208-201ENSMUST00000119645 678 ntBASIC11.61□□□□□ -0.55
Rif1Q6PR54 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Gm25951-201ENSMUST00000175330 64 ntBASIC11.61□□□□□ -0.55
Rif1Q6PR54 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Gm37905-201ENSMUST00000195310 341 ntBASIC11.61□□□□□ -0.55
Rif1Q6PR54 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rif1Q6PR54 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rif1Q6PR54 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms