Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Snrnp40Q6PE01 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Gm13369-201ENSMUST00000119442 987 ntBASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Gm18935-201ENSMUST00000212692 664 ntBASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Snora73a-201ENSMUST00000082453 205 ntBASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Snrnp40Q6PE01 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Gm26315-201ENSMUST00000083890 321 ntBASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.1□□□□□ -0.47
Snrnp40Q6PE01 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Snrnp40Q6PE01 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms