Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.17□□□□□ -0.3
Rai1Q61818 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.17□□□□□ -0.3
Rai1Q61818 Gm2991-201ENSMUST00000173338 480 ntBASIC13.17□□□□□ -0.3
Rai1Q61818 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.17□□□□□ -0.3
Rai1Q61818 Gm44364-201ENSMUST00000198368 141 ntBASIC13.17□□□□□ -0.3
Rai1Q61818 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Rai1Q61818 Gm18935-201ENSMUST00000212692 664 ntBASIC13.17□□□□□ -0.3
Rai1Q61818 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.17□□□□□ -0.3
Rai1Q61818 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Gm10268-201ENSMUST00000085340 555 ntBASIC13.17□□□□□ -0.3
Rai1Q61818 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rai1Q61818 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rai1Q61818 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.17□□□□□ -0.3
Rai1Q61818 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rai1Q61818 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.17□□□□□ -0.3
Rai1Q61818 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rai1Q61818 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rai1Q61818 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Gm4857-201ENSMUST00000192718 785 ntBASIC13.16□□□□□ -0.3
Rai1Q61818 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.16□□□□□ -0.3
Rai1Q61818 Gm38158-201ENSMUST00000194617 339 ntBASIC13.16□□□□□ -0.3
Rai1Q61818 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.16□□□□□ -0.3
Rai1Q61818 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.16□□□□□ -0.3
Rai1Q61818 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Rai1Q61818 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rai1Q61818 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.16□□□□□ -0.3
Rai1Q61818 Gm38144-201ENSMUST00000192790 465 ntBASIC13.16□□□□□ -0.3
Rai1Q61818 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.16□□□□□ -0.3
Rai1Q61818 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Gm18056-201ENSMUST00000207670 568 ntBASIC13.16□□□□□ -0.3
Rai1Q61818 Gm18061-201ENSMUST00000208350 562 ntBASIC13.16□□□□□ -0.3
Rai1Q61818 Gm18063-201ENSMUST00000208529 568 ntBASIC13.16□□□□□ -0.3
Rai1Q61818 Gm18052-201ENSMUST00000208750 559 ntBASIC13.16□□□□□ -0.3
Rai1Q61818 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.16□□□□□ -0.3
Rai1Q61818 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rai1Q61818 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.16□□□□□ -0.3
Rai1Q61818 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rai1Q61818 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rai1Q61818 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rai1Q61818 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.15□□□□□ -0.3
Rai1Q61818 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rai1Q61818 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rai1Q61818 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rai1Q61818 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rai1Q61818 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rai1Q61818 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rai1Q61818 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rai1Q61818 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rai1Q61818 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Rai1Q61818 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rai1Q61818 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rai1Q61818 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rai1Q61818 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms