Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccne1Q61457 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccne1Q61457 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Ccne1Q61457 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.9■□□□□ 0.46
Ccne1Q61457 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.9■□□□□ 0.46
Ccne1Q61457 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.9■□□□□ 0.46
Ccne1Q61457 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.9■□□□□ 0.46
Ccne1Q61457 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ccne1Q61457 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ccne1Q61457 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccne1Q61457 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ccne1Q61457 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Ccne1Q61457 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccne1Q61457 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Ccne1Q61457 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccne1Q61457 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccne1Q61457 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Ccne1Q61457 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.89■□□□□ 0.45
Ccne1Q61457 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ccne1Q61457 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.89■□□□□ 0.45
Ccne1Q61457 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccne1Q61457 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.89■□□□□ 0.45
Ccne1Q61457 Gm43179-201ENSMUST00000198797 275 ntBASIC17.89■□□□□ 0.45
Ccne1Q61457 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccne1Q61457 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccne1Q61457 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccne1Q61457 Gm7399-201ENSMUST00000032395 858 ntBASIC17.89■□□□□ 0.45
Ccne1Q61457 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccne1Q61457 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccne1Q61457 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccne1Q61457 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccne1Q61457 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Ccne1Q61457 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Ccne1Q61457 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccne1Q61457 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.89■□□□□ 0.45
Ccne1Q61457 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccne1Q61457 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccne1Q61457 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccne1Q61457 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccne1Q61457 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.89■□□□□ 0.45
Ccne1Q61457 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccne1Q61457 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.89■□□□□ 0.45
Ccne1Q61457 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccne1Q61457 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccne1Q61457 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccne1Q61457 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccne1Q61457 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccne1Q61457 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccne1Q61457 Gm27682-201ENSMUST00000183930 110 ntBASIC17.88■□□□□ 0.45
Ccne1Q61457 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.88■□□□□ 0.45
Ccne1Q61457 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccne1Q61457 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccne1Q61457 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccne1Q61457 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccne1Q61457 Gm9823-201ENSMUST00000051212 327 ntBASIC17.88■□□□□ 0.45
Ccne1Q61457 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ccne1Q61457 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccne1Q61457 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccne1Q61457 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Ccne1Q61457 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccne1Q61457 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccne1Q61457 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccne1Q61457 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccne1Q61457 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccne1Q61457 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccne1Q61457 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Ccne1Q61457 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccne1Q61457 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccne1Q61457 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccne1Q61457 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC17.87■□□□□ 0.45
Ccne1Q61457 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.87■□□□□ 0.45
Ccne1Q61457 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccne1Q61457 Gm1335-201ENSMUST00000121653 386 ntBASIC17.87■□□□□ 0.45
Ccne1Q61457 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.87■□□□□ 0.45
Ccne1Q61457 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccne1Q61457 Gm4271-201ENSMUST00000174444 973 ntBASIC17.87■□□□□ 0.45
Ccne1Q61457 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.87■□□□□ 0.45
Ccne1Q61457 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms