Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.35□□□□□ -0.27
Col12a1Q60847 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.35□□□□□ -0.27
Col12a1Q60847 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Col12a1Q60847 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Col12a1Q60847 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col12a1Q60847 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col12a1Q60847 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.34□□□□□ -0.27
Col12a1Q60847 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.34□□□□□ -0.27
Col12a1Q60847 Gm11675-201ENSMUST00000121873 832 ntBASIC13.34□□□□□ -0.27
Col12a1Q60847 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.34□□□□□ -0.27
Col12a1Q60847 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col12a1Q60847 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.34□□□□□ -0.27
Col12a1Q60847 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.34□□□□□ -0.27
Col12a1Q60847 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Col12a1Q60847 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col12a1Q60847 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col12a1Q60847 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.34□□□□□ -0.27
Col12a1Q60847 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.34□□□□□ -0.27
Col12a1Q60847 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.34□□□□□ -0.27
Col12a1Q60847 Gm8738-201ENSMUST00000172606 329 ntBASIC13.34□□□□□ -0.27
Col12a1Q60847 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.34□□□□□ -0.27
Col12a1Q60847 Gm7600-201ENSMUST00000209657 785 ntBASIC13.34□□□□□ -0.27
Col12a1Q60847 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.34□□□□□ -0.27
Col12a1Q60847 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col12a1Q60847 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col12a1Q60847 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col12a1Q60847 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.34□□□□□ -0.27
Col12a1Q60847 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col12a1Q60847 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col12a1Q60847 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col12a1Q60847 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Col12a1Q60847 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Col12a1Q60847 Gm31256-201ENSMUST00000194705 506 ntBASIC13.33□□□□□ -0.27
Col12a1Q60847 AC099645.1-201ENSMUST00000226476 1105 ntBASIC13.33□□□□□ -0.27
Col12a1Q60847 Gm16372-201ENSMUST00000073088 450 ntBASIC13.33□□□□□ -0.27
Col12a1Q60847 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Col12a1Q60847 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col12a1Q60847 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.33□□□□□ -0.28
Col12a1Q60847 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Col12a1Q60847 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 Gm7003-201ENSMUST00000195089 312 ntBASIC13.33□□□□□ -0.28
Col12a1Q60847 Gm44262-201ENSMUST00000204969 372 ntBASIC13.33□□□□□ -0.28
Col12a1Q60847 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.33□□□□□ -0.28
Col12a1Q60847 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.33□□□□□ -0.28
Col12a1Q60847 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.33□□□□□ -0.28
Col12a1Q60847 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.33□□□□□ -0.28
Col12a1Q60847 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.33□□□□□ -0.28
Col12a1Q60847 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.33□□□□□ -0.28
Col12a1Q60847 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.33□□□□□ -0.28
Col12a1Q60847 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col12a1Q60847 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col12a1Q60847 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.32□□□□□ -0.28
Col12a1Q60847 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.32□□□□□ -0.28
Col12a1Q60847 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col12a1Q60847 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms