Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Gm11185-201ENSMUST00000117732 1007 ntBASIC9.44□□□□□ -0.9
Cops9Q3U898 Gm8097-201ENSMUST00000117903 829 ntBASIC9.44□□□□□ -0.9
Cops9Q3U898 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Gm45747-201ENSMUST00000212203 999 ntBASIC9.44□□□□□ -0.9
Cops9Q3U898 AC108846.1-201ENSMUST00000214531 513 ntBASIC9.44□□□□□ -0.9
Cops9Q3U898 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC9.44□□□□□ -0.9
Cops9Q3U898 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Gm43463-201ENSMUST00000195967 1803 ntBASIC9.44□□□□□ -0.9
Cops9Q3U898 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.44□□□□□ -0.9
Cops9Q3U898 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Gm18263-201ENSMUST00000220846 1928 ntBASIC9.44□□□□□ -0.9
Cops9Q3U898 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cops9Q3U898 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.44□□□□□ -0.9
Cops9Q3U898 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cops9Q3U898 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cops9Q3U898 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC9.43□□□□□ -0.9
Cops9Q3U898 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cops9Q3U898 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC9.43□□□□□ -0.9
Cops9Q3U898 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Gm7899-201ENSMUST00000192935 1897 ntBASIC9.43□□□□□ -0.9
Cops9Q3U898 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.43□□□□□ -0.9
Cops9Q3U898 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC9.43□□□□□ -0.9
Cops9Q3U898 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Gm9109-201ENSMUST00000120254 1405 ntBASIC9.43□□□□□ -0.9
Cops9Q3U898 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Mir874-201ENSMUST00000104769 76 ntBASIC9.43□□□□□ -0.9
Cops9Q3U898 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC9.43□□□□□ -0.9
Cops9Q3U898 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC9.43□□□□□ -0.9
Cops9Q3U898 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Cops9Q3U898 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Cops9Q3U898 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Cops9Q3U898 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Cops9Q3U898 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Gm37055-201ENSMUST00000191866 133 ntBASIC9.43□□□□□ -0.9
Cops9Q3U898 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cops9Q3U898 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Gm45638-201ENSMUST00000211507 2878 ntBASIC9.43□□□□□ -0.9
Cops9Q3U898 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Cops9Q3U898 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cops9Q3U898 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cops9Q3U898 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms