Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Gm7399-201ENSMUST00000032395 858 ntBASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tmem88bQ3TYP4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Gm27772-201ENSMUST00000184900 187 ntBASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Gm37714-201ENSMUST00000194742 342 ntBASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Gm40466-201ENSMUST00000212174 422 ntBASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tmem88bQ3TYP4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Gm24420-201ENSMUST00000176676 59 ntBASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Tmem88bQ3TYP4 Gm6983-201ENSMUST00000214912 628 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms