Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hddc2Q3SXD3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hddc2Q3SXD3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hddc2Q3SXD3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hddc2Q3SXD3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hddc2Q3SXD3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hddc2Q3SXD3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hddc2Q3SXD3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hddc2Q3SXD3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hddc2Q3SXD3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hddc2Q3SXD3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hddc2Q3SXD3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hddc2Q3SXD3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hddc2Q3SXD3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Gm12895-201ENSMUST00000122214 226 ntBASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Grk6-207ENSMUST00000225925 2769 ntBASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Hddc2Q3SXD3 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Gm12644-201ENSMUST00000119935 606 ntBASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Gm8584-201ENSMUST00000171982 758 ntBASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Gm10499-201ENSMUST00000174094 934 ntBASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Gm33142-201ENSMUST00000193913 867 ntBASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hddc2Q3SXD3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hddc2Q3SXD3 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms