Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.92□□□□□ -0.18
Pfdn6Q03958 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.92□□□□□ -0.18
Pfdn6Q03958 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Pfdn6Q03958 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.92□□□□□ -0.18
Pfdn6Q03958 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.92□□□□□ -0.18
Pfdn6Q03958 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pfdn6Q03958 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pfdn6Q03958 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pfdn6Q03958 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.91□□□□□ -0.18
Pfdn6Q03958 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.91□□□□□ -0.18
Pfdn6Q03958 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Gm27622-201ENSMUST00000183779 60 ntBASIC13.91□□□□□ -0.18
Pfdn6Q03958 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.91□□□□□ -0.18
Pfdn6Q03958 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.91□□□□□ -0.18
Pfdn6Q03958 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.91□□□□□ -0.18
Pfdn6Q03958 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pfdn6Q03958 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.9□□□□□ -0.18
Pfdn6Q03958 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Gm33320-201ENSMUST00000192232 530 ntBASIC13.9□□□□□ -0.18
Pfdn6Q03958 Gm29741-201ENSMUST00000192667 421 ntBASIC13.9□□□□□ -0.18
Pfdn6Q03958 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pfdn6Q03958 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms