Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrn1P97789 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrn1P97789 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrn1P97789 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Xrn1P97789 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Xrn1P97789 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Xrn1P97789 Gm23200-201ENSMUST00000104379 132 ntBASIC19.23■□□□□ 0.67
Xrn1P97789 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC19.23■□□□□ 0.67
Xrn1P97789 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Xrn1P97789 Gm14726-201ENSMUST00000120623 896 ntBASIC19.23■□□□□ 0.67
Xrn1P97789 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC19.23■□□□□ 0.67
Xrn1P97789 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC19.23■□□□□ 0.67
Xrn1P97789 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Xrn1P97789 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Xrn1P97789 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Xrn1P97789 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Xrn1P97789 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Xrn1P97789 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Xrn1P97789 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Xrn1P97789 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Xrn1P97789 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Xrn1P97789 Gm37827-201ENSMUST00000194486 1542 ntBASIC19.22■□□□□ 0.67
Xrn1P97789 Gm43947-201ENSMUST00000203019 959 ntBASIC19.22■□□□□ 0.67
Xrn1P97789 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC19.22■□□□□ 0.67
Xrn1P97789 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.22■□□□□ 0.67
Xrn1P97789 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC19.22■□□□□ 0.67
Xrn1P97789 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrn1P97789 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Xrn1P97789 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrn1P97789 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Xrn1P97789 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Xrn1P97789 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Xrn1P97789 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Xrn1P97789 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrn1P97789 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrn1P97789 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Xrn1P97789 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrn1P97789 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Xrn1P97789 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Xrn1P97789 Gm12134-201ENSMUST00000122109 520 ntBASIC19.22■□□□□ 0.67
Xrn1P97789 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Xrn1P97789 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC19.22■□□□□ 0.67
Xrn1P97789 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Xrn1P97789 Gm37297-201ENSMUST00000192974 2384 ntBASIC19.22■□□□□ 0.67
Xrn1P97789 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Xrn1P97789 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Xrn1P97789 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrn1P97789 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrn1P97789 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.21■□□□□ 0.67
Xrn1P97789 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC19.21■□□□□ 0.67
Xrn1P97789 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Xrn1P97789 Gm45224-201ENSMUST00000208203 414 ntBASIC19.21■□□□□ 0.67
Xrn1P97789 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC19.21■□□□□ 0.67
Xrn1P97789 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrn1P97789 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrn1P97789 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Xrn1P97789 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrn1P97789 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Xrn1P97789 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrn1P97789 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrn1P97789 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrn1P97789 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Xrn1P97789 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Xrn1P97789 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC19.2■□□□□ 0.66
Xrn1P97789 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Xrn1P97789 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Xrn1P97789 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Xrn1P97789 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Xrn1P97789 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Xrn1P97789 Gm31256-201ENSMUST00000194705 506 ntBASIC19.2■□□□□ 0.66
Xrn1P97789 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC19.2■□□□□ 0.66
Xrn1P97789 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Gm10605-202ENSMUST00000183019 3198 ntBASIC19.2■□□□□ 0.66
Xrn1P97789 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Xrn1P97789 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Xrn1P97789 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Xrn1P97789 Gm14017-201ENSMUST00000121934 386 ntBASIC19.2■□□□□ 0.66
Xrn1P97789 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Xrn1P97789 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC19.2■□□□□ 0.66
Xrn1P97789 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC19.2■□□□□ 0.66
Xrn1P97789 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Xrn1P97789 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms