Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vbp1P61759 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vbp1P61759 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vbp1P61759 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.53□□□□□ -0.4
Vbp1P61759 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vbp1P61759 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vbp1P61759 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vbp1P61759 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vbp1P61759 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vbp1P61759 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vbp1P61759 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vbp1P61759 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vbp1P61759 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vbp1P61759 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.52□□□□□ -0.4
Vbp1P61759 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vbp1P61759 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.52□□□□□ -0.41
Vbp1P61759 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.52□□□□□ -0.41
Vbp1P61759 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.52□□□□□ -0.41
Vbp1P61759 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.52□□□□□ -0.41
Vbp1P61759 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.52□□□□□ -0.41
Vbp1P61759 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.52□□□□□ -0.41
Vbp1P61759 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Vbp1P61759 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Vbp1P61759 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vbp1P61759 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Vbp1P61759 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.51□□□□□ -0.41
Vbp1P61759 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Paupar-201ENSMUST00000194826 3482 ntBASIC12.51□□□□□ -0.41
Vbp1P61759 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Vbp1P61759 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Vbp1P61759 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.51□□□□□ -0.41
Vbp1P61759 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.51□□□□□ -0.41
Vbp1P61759 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Vbp1P61759 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vbp1P61759 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vbp1P61759 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.5□□□□□ -0.41
Vbp1P61759 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vbp1P61759 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vbp1P61759 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Vbp1P61759 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.5□□□□□ -0.41
Vbp1P61759 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vbp1P61759 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.5□□□□□ -0.41
Vbp1P61759 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vbp1P61759 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vbp1P61759 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vbp1P61759 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vbp1P61759 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vbp1P61759 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vbp1P61759 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vbp1P61759 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vbp1P61759 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vbp1P61759 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vbp1P61759 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vbp1P61759 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.5□□□□□ -0.41
Vbp1P61759 Gm25016-201ENSMUST00000158399 131 ntBASIC12.5□□□□□ -0.41
Vbp1P61759 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vbp1P61759 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vbp1P61759 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms