Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.07□□□□□ -0.32
Nup43P59235 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.07□□□□□ -0.32
Nup43P59235 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.07□□□□□ -0.32
Nup43P59235 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.07□□□□□ -0.32
Nup43P59235 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Gm15321-201ENSMUST00000121290 288 ntBASIC13.07□□□□□ -0.32
Nup43P59235 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Nup43P59235 Gm16215-201ENSMUST00000161990 637 ntBASIC13.07□□□□□ -0.32
Nup43P59235 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Nup43P59235 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.07□□□□□ -0.32
Nup43P59235 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nup43P59235 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Nup43P59235 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.07□□□□□ -0.32
Nup43P59235 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nup43P59235 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nup43P59235 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Nup43P59235 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.06□□□□□ -0.32
Nup43P59235 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nup43P59235 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Gm21854-201ENSMUST00000179901 471 ntBASIC13.06□□□□□ -0.32
Nup43P59235 Mir6977-201ENSMUST00000184960 64 ntBASIC13.06□□□□□ -0.32
Nup43P59235 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.06□□□□□ -0.32
Nup43P59235 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.06□□□□□ -0.32
Nup43P59235 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.06□□□□□ -0.32
Nup43P59235 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.06□□□□□ -0.32
Nup43P59235 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.06□□□□□ -0.32
Nup43P59235 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.06□□□□□ -0.32
Nup43P59235 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.06□□□□□ -0.32
Nup43P59235 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nup43P59235 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nup43P59235 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nup43P59235 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.05□□□□□ -0.32
Nup43P59235 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nup43P59235 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Nup43P59235 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Nup43P59235 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.05□□□□□ -0.32
Nup43P59235 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.05□□□□□ -0.32
Nup43P59235 Gm24420-201ENSMUST00000176676 59 ntBASIC13.05□□□□□ -0.32
Nup43P59235 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.05□□□□□ -0.32
Nup43P59235 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nup43P59235 Gm7730-201ENSMUST00000212486 454 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms