Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.64□□□□□ -0.39
Cdh11P55288 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Cdh11P55288 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cdh11P55288 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdh11P55288 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Cdh11P55288 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.63□□□□□ -0.39
Cdh11P55288 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdh11P55288 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.63□□□□□ -0.39
Cdh11P55288 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.63□□□□□ -0.39
Cdh11P55288 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.63□□□□□ -0.39
Cdh11P55288 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.63□□□□□ -0.39
Cdh11P55288 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cdh11P55288 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Cdh11P55288 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cdh11P55288 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdh11P55288 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.62□□□□□ -0.39
Cdh11P55288 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Grk6-205ENSMUST00000224653 2976 ntBASIC12.62□□□□□ -0.39
Cdh11P55288 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.62□□□□□ -0.39
Cdh11P55288 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.62□□□□□ -0.39
Cdh11P55288 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.62□□□□□ -0.39
Cdh11P55288 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cdh11P55288 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cdh11P55288 Mir7023-201ENSMUST00000185093 64 ntBASIC12.62□□□□□ -0.39
Cdh11P55288 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.62□□□□□ -0.39
Cdh11P55288 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cdh11P55288 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cdh11P55288 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.62□□□□□ -0.39
Cdh11P55288 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cdh11P55288 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.61□□□□□ -0.39
Cdh11P55288 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cdh11P55288 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms