Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.61□□□□□ -0.07
Shmt1P50431 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Gm18018-201ENSMUST00000198273 408 ntBASIC14.61□□□□□ -0.07
Shmt1P50431 Gm9908-201ENSMUST00000211534 448 ntBASIC14.61□□□□□ -0.07
Shmt1P50431 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.61□□□□□ -0.07
Shmt1P50431 Gm19220-201ENSMUST00000222682 803 ntBASIC14.61□□□□□ -0.07
Shmt1P50431 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.61□□□□□ -0.07
Shmt1P50431 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Shmt1P50431 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.6□□□□□ -0.07
Shmt1P50431 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Shmt1P50431 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Shmt1P50431 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.6□□□□□ -0.07
Shmt1P50431 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.6□□□□□ -0.07
Shmt1P50431 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Shmt1P50431 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Gm15678-201ENSMUST00000117573 960 ntBASIC14.6□□□□□ -0.07
Shmt1P50431 Gm14127-201ENSMUST00000117906 678 ntBASIC14.6□□□□□ -0.07
Shmt1P50431 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.6□□□□□ -0.07
Shmt1P50431 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.6□□□□□ -0.07
Shmt1P50431 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.6□□□□□ -0.07
Shmt1P50431 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.6□□□□□ -0.07
Shmt1P50431 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.6□□□□□ -0.07
Shmt1P50431 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Shmt1P50431 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Shmt1P50431 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.6□□□□□ -0.07
Shmt1P50431 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Shmt1P50431 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.59□□□□□ -0.07
Shmt1P50431 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.59□□□□□ -0.07
Shmt1P50431 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Gm19078-201ENSMUST00000206311 727 ntBASIC14.59□□□□□ -0.07
Shmt1P50431 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.59□□□□□ -0.07
Shmt1P50431 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.59□□□□□ -0.07
Shmt1P50431 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Shmt1P50431 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.59□□□□□ -0.07
Shmt1P50431 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Shmt1P50431 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Shmt1P50431 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Shmt1P50431 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shmt1P50431 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Shmt1P50431 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shmt1P50431 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Shmt1P50431 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shmt1P50431 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shmt1P50431 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Shmt1P50431 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shmt1P50431 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms