Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm22331-201ENSMUST00000158066 136 ntBASIC16.23■□□□□ 0.19
LtbrP50284 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LtbrP50284 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.23■□□□□ 0.19
LtbrP50284 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.23■□□□□ 0.19
LtbrP50284 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.23■□□□□ 0.19
LtbrP50284 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LtbrP50284 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC16.23■□□□□ 0.19
LtbrP50284 Gm43758-201ENSMUST00000199500 367 ntBASIC16.23■□□□□ 0.19
LtbrP50284 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.23■□□□□ 0.19
LtbrP50284 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LtbrP50284 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LtbrP50284 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LtbrP50284 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LtbrP50284 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LtbrP50284 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.23■□□□□ 0.19
LtbrP50284 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LtbrP50284 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LtbrP50284 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LtbrP50284 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.22■□□□□ 0.19
LtbrP50284 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LtbrP50284 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LtbrP50284 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.22■□□□□ 0.19
LtbrP50284 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 Mir877-201ENSMUST00000104738 85 ntBASIC16.22■□□□□ 0.19
LtbrP50284 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC16.22■□□□□ 0.19
LtbrP50284 Gm13342-201ENSMUST00000121055 207 ntBASIC16.22■□□□□ 0.19
LtbrP50284 Gm12176-201ENSMUST00000121420 875 ntBASIC16.22■□□□□ 0.19
LtbrP50284 Gm15376-201ENSMUST00000122258 783 ntBASIC16.22■□□□□ 0.19
LtbrP50284 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC16.22■□□□□ 0.19
LtbrP50284 Gm26083-201ENSMUST00000157904 193 ntBASIC16.22■□□□□ 0.19
LtbrP50284 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC16.22■□□□□ 0.19
LtbrP50284 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 Gm12846-201ENSMUST00000120431 1373 ntBASIC16.22■□□□□ 0.19
LtbrP50284 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.22■□□□□ 0.19
LtbrP50284 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.22■□□□□ 0.19
LtbrP50284 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LtbrP50284 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LtbrP50284 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LtbrP50284 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LtbrP50284 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.21■□□□□ 0.19
LtbrP50284 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
LtbrP50284 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LtbrP50284 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LtbrP50284 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LtbrP50284 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LtbrP50284 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LtbrP50284 Gm44364-201ENSMUST00000198368 141 ntBASIC16.21■□□□□ 0.19
LtbrP50284 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LtbrP50284 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LtbrP50284 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.21■□□□□ 0.19
LtbrP50284 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.21■□□□□ 0.19
LtbrP50284 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.21■□□□□ 0.19
LtbrP50284 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LtbrP50284 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LtbrP50284 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC16.2■□□□□ 0.18
LtbrP50284 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LtbrP50284 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC16.2■□□□□ 0.18
LtbrP50284 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.2■□□□□ 0.18
LtbrP50284 Gm43118-201ENSMUST00000199149 775 ntBASIC16.2■□□□□ 0.18
LtbrP50284 Gm6983-201ENSMUST00000214912 628 ntBASIC16.2■□□□□ 0.18
LtbrP50284 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.2■□□□□ 0.18
LtbrP50284 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LtbrP50284 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LtbrP50284 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LtbrP50284 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LtbrP50284 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms