Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Vps4bP46467 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vps4bP46467 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vps4bP46467 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vps4bP46467 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Vps4bP46467 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vps4bP46467 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vps4bP46467 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vps4bP46467 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vps4bP46467 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vps4bP46467 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.03□□□□□ -0.16
Vps4bP46467 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Vps4bP46467 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 Gm24158-201ENSMUST00000175263 71 ntBASIC14.03□□□□□ -0.16
Vps4bP46467 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.03□□□□□ -0.16
Vps4bP46467 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.03□□□□□ -0.16
Vps4bP46467 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vps4bP46467 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vps4bP46467 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.03□□□□□ -0.16
Vps4bP46467 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vps4bP46467 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Vps4bP46467 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vps4bP46467 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vps4bP46467 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps4bP46467 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vps4bP46467 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps4bP46467 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps4bP46467 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps4bP46467 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps4bP46467 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Vps4bP46467 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps4bP46467 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.02□□□□□ -0.16
Vps4bP46467 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vps4bP46467 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vps4bP46467 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Gm22065-201ENSMUST00000103753 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm22066-201ENSMUST00000103761 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm24932-201ENSMUST00000103763 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm24115-201ENSMUST00000103799 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm22190-201ENSMUST00000103827 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm22191-201ENSMUST00000103831 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm24721-201ENSMUST00000103849 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm28018-201ENSMUST00000103869 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm26399-201ENSMUST00000103937 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.02□□□□□ -0.17
Vps4bP46467 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.17
Vps4bP46467 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Gm25349-201ENSMUST00000177728 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm23616-201ENSMUST00000177797 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm25871-201ENSMUST00000177816 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm24752-201ENSMUST00000178240 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm24496-201ENSMUST00000178287 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm25649-201ENSMUST00000178476 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm25548-201ENSMUST00000178681 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm23147-201ENSMUST00000178841 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm26095-201ENSMUST00000179270 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm22171-201ENSMUST00000179283 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm23936-201ENSMUST00000179354 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm22619-201ENSMUST00000179516 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm25255-201ENSMUST00000179579 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm24755-201ENSMUST00000179691 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm26506-201ENSMUST00000179692 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm25086-201ENSMUST00000179931 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm23243-201ENSMUST00000180047 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm24659-201ENSMUST00000180212 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm24169-201ENSMUST00000180244 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm23689-201ENSMUST00000180354 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm27359-201ENSMUST00000184153 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm27785-201ENSMUST00000184268 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm27466-201ENSMUST00000184396 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm27703-201ENSMUST00000184836 110 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Gm37714-201ENSMUST00000194742 342 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.02□□□□□ -0.17
Vps4bP46467 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vps4bP46467 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Vps4bP46467 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms