Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cxcl12P40224 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cxcl12P40224 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cxcl12P40224 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cxcl12P40224 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Cxcl12P40224 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.14□□□□□ -0.15
Cxcl12P40224 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
Cxcl12P40224 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.14□□□□□ -0.15
Cxcl12P40224 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Gm2231-201ENSMUST00000125661 612 ntBASIC14.14□□□□□ -0.15
Cxcl12P40224 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.14□□□□□ -0.15
Cxcl12P40224 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.14□□□□□ -0.15
Cxcl12P40224 Gm37986-201ENSMUST00000193285 383 ntBASIC14.14□□□□□ -0.15
Cxcl12P40224 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.14□□□□□ -0.15
Cxcl12P40224 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.14□□□□□ -0.15
Cxcl12P40224 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.14□□□□□ -0.15
Cxcl12P40224 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cxcl12P40224 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cxcl12P40224 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cxcl12P40224 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.13□□□□□ -0.15
Cxcl12P40224 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Cxcl12P40224 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.13□□□□□ -0.15
Cxcl12P40224 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.13□□□□□ -0.15
Cxcl12P40224 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.13□□□□□ -0.15
Cxcl12P40224 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.13□□□□□ -0.15
Cxcl12P40224 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.13□□□□□ -0.15
Cxcl12P40224 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.13□□□□□ -0.15
Cxcl12P40224 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.13□□□□□ -0.15
Cxcl12P40224 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cxcl12P40224 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Cxcl12P40224 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
Cxcl12P40224 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.13□□□□□ -0.15
Cxcl12P40224 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cxcl12P40224 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cxcl12P40224 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.12□□□□□ -0.15
Cxcl12P40224 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Cxcl12P40224 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.12□□□□□ -0.15
Cxcl12P40224 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.12□□□□□ -0.15
Cxcl12P40224 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cxcl12P40224 Gm11591-201ENSMUST00000120063 702 ntBASIC14.12□□□□□ -0.15
Cxcl12P40224 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.12□□□□□ -0.15
Cxcl12P40224 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.12□□□□□ -0.15
Cxcl12P40224 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.12□□□□□ -0.15
Cxcl12P40224 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.12□□□□□ -0.15
Cxcl12P40224 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.12□□□□□ -0.15
Cxcl12P40224 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cxcl12P40224 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms