Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Sox5P35710 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox5P35710 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox5P35710 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox5P35710 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox5P35710 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox5P35710 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox5P35710 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox5P35710 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Sox5P35710 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.11■□□□□ 0.01
Sox5P35710 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox5P35710 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sox5P35710 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sox5P35710 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sox5P35710 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Gm18889-201ENSMUST00000174284 929 ntBASIC15.1■□□□□ 0.01
Sox5P35710 Gm6443-201ENSMUST00000203599 874 ntBASIC15.1■□□□□ 0.01
Sox5P35710 Gm18206-201ENSMUST00000207027 926 ntBASIC15.1■□□□□ 0.01
Sox5P35710 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.1■□□□□ 0.01
Sox5P35710 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sox5P35710 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Sox5P35710 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sox5P35710 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.09■□□□□ 0.01
Sox5P35710 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sox5P35710 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.09■□□□□ 0.01
Sox5P35710 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Sox5P35710 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.09■□□□□ 0.01
Sox5P35710 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.09■□□□□ 0.01
Sox5P35710 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.09■□□□□ 0.01
Sox5P35710 Gm29541-201ENSMUST00000191351 678 ntBASIC15.09■□□□□ 0.01
Sox5P35710 Gm44719-201ENSMUST00000206404 149 ntBASIC15.09■□□□□ 0.01
Sox5P35710 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.09■□□□□ 0.01
Sox5P35710 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Sox5P35710 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sox5P35710 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sox5P35710 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sox5P35710 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Sox5P35710 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.09■□□□□ 0.01
Sox5P35710 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Sox5P35710 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Sox5P35710 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sox5P35710 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sox5P35710 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sox5P35710 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.08■□□□□ 0.01
Sox5P35710 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Sox5P35710 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sox5P35710 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Sox5P35710 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.08■□□□□ 0
Sox5P35710 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sox5P35710 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.08■□□□□ 0
Sox5P35710 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.08■□□□□ 0
Sox5P35710 Gm13365-201ENSMUST00000121188 973 ntBASIC15.08■□□□□ 0
Sox5P35710 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sox5P35710 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.08■□□□□ 0
Sox5P35710 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms