Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.19□□□□□ -0.46
Cd28P31041 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Gm2445-201ENSMUST00000182798 989 ntBASIC12.19□□□□□ -0.46
Cd28P31041 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cd28P31041 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.19□□□□□ -0.46
Cd28P31041 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd28P31041 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Cd28P31041 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Cd28P31041 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cd28P31041 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cd28P31041 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.18□□□□□ -0.46
Cd28P31041 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.18□□□□□ -0.46
Cd28P31041 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Gm27628-201ENSMUST00000184911 107 ntBASIC12.18□□□□□ -0.46
Cd28P31041 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.18□□□□□ -0.46
Cd28P31041 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.18□□□□□ -0.46
Cd28P31041 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.18□□□□□ -0.46
Cd28P31041 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.18□□□□□ -0.46
Cd28P31041 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cd28P31041 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.18□□□□□ -0.46
Cd28P31041 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cd28P31041 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cd28P31041 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cd28P31041 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.17□□□□□ -0.46
Cd28P31041 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Cd28P31041 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cd28P31041 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.17□□□□□ -0.46
Cd28P31041 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cd28P31041 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cd28P31041 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Gm12882-201ENSMUST00000121696 517 ntBASIC12.17□□□□□ -0.46
Cd28P31041 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.17□□□□□ -0.46
Cd28P31041 Gm27920-201ENSMUST00000183953 96 ntBASIC12.17□□□□□ -0.46
Cd28P31041 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.17□□□□□ -0.46
Cd28P31041 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.17□□□□□ -0.46
Cd28P31041 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.17□□□□□ -0.46
Cd28P31041 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.17□□□□□ -0.46
Cd28P31041 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cd28P31041 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cd28P31041 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cd28P31041 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cd28P31041 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Cd28P31041 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Cd28P31041 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cd28P31041 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms