Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.76□□□□□ -0.05
Mmp3P28862 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Mmp3P28862 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.76□□□□□ -0.05
Mmp3P28862 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.76□□□□□ -0.05
Mmp3P28862 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.76□□□□□ -0.05
Mmp3P28862 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Mmp3P28862 Gm18473-201ENSMUST00000220543 868 ntBASIC14.76□□□□□ -0.05
Mmp3P28862 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.76□□□□□ -0.05
Mmp3P28862 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.76□□□□□ -0.05
Mmp3P28862 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.76□□□□□ -0.05
Mmp3P28862 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Mmp3P28862 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.76□□□□□ -0.05
Mmp3P28862 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.76□□□□□ -0.05
Mmp3P28862 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.76□□□□□ -0.05
Mmp3P28862 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Mmp3P28862 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Mmp3P28862 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mmp3P28862 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Mmp3P28862 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Mmp3P28862 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mmp3P28862 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Mmp3P28862 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.75□□□□□ -0.05
Mmp3P28862 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Mmp3P28862 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Mmp3P28862 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.75□□□□□ -0.05
Mmp3P28862 Gm27847-201ENSMUST00000183711 107 ntBASIC14.75□□□□□ -0.05
Mmp3P28862 Gm27375-201ENSMUST00000183799 107 ntBASIC14.75□□□□□ -0.05
Mmp3P28862 Gm29608-201ENSMUST00000190444 463 ntBASIC14.75□□□□□ -0.05
Mmp3P28862 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.75□□□□□ -0.05
Mmp3P28862 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.75□□□□□ -0.05
Mmp3P28862 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.75□□□□□ -0.05
Mmp3P28862 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.75□□□□□ -0.05
Mmp3P28862 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.75□□□□□ -0.05
Mmp3P28862 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.75□□□□□ -0.05
Mmp3P28862 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mmp3P28862 Gm10012-201ENSMUST00000078252 192 ntBASIC14.75□□□□□ -0.05
Mmp3P28862 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mmp3P28862 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Mmp3P28862 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Mmp3P28862 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Mmp3P28862 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Mmp3P28862 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mmp3P28862 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mmp3P28862 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mmp3P28862 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mmp3P28862 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Mmp3P28862 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Mmp3P28862 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Mmp3P28862 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Mmp3P28862 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.74□□□□□ -0.05
Mmp3P28862 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Gm13226-201ENSMUST00000117838 404 ntBASIC14.74□□□□□ -0.05
Mmp3P28862 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.74□□□□□ -0.05
Mmp3P28862 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.74□□□□□ -0.05
Mmp3P28862 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.74□□□□□ -0.05
Mmp3P28862 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.74□□□□□ -0.05
Mmp3P28862 Gm24196-201ENSMUST00000179161 110 ntBASIC14.74□□□□□ -0.05
Mmp3P28862 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.74□□□□□ -0.05
Mmp3P28862 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.74□□□□□ -0.05
Mmp3P28862 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.74□□□□□ -0.05
Mmp3P28862 Gm17330-201ENSMUST00000221047 165 ntBASIC14.74□□□□□ -0.05
Mmp3P28862 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.74□□□□□ -0.05
Mmp3P28862 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.74□□□□□ -0.05
Mmp3P28862 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Mmp3P28862 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Mmp3P28862 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms