Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col8a2P25318 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col8a2P25318 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Col8a2P25318 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.54□□□□□ -0.56
Col8a2P25318 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Gm4804-201ENSMUST00000182234 999 ntBASIC11.54□□□□□ -0.56
Col8a2P25318 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col8a2P25318 Gm29741-201ENSMUST00000192667 421 ntBASIC11.54□□□□□ -0.56
Col8a2P25318 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.54□□□□□ -0.56
Col8a2P25318 Gm18018-201ENSMUST00000198273 408 ntBASIC11.54□□□□□ -0.56
Col8a2P25318 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.54□□□□□ -0.56
Col8a2P25318 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.54□□□□□ -0.56
Col8a2P25318 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.54□□□□□ -0.56
Col8a2P25318 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Gm15823-201ENSMUST00000064305 670 ntBASIC11.54□□□□□ -0.56
Col8a2P25318 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.54□□□□□ -0.56
Col8a2P25318 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.54□□□□□ -0.56
Col8a2P25318 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.54□□□□□ -0.56
Col8a2P25318 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Col8a2P25318 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Col8a2P25318 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col8a2P25318 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Col8a2P25318 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col8a2P25318 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.54□□□□□ -0.56
Col8a2P25318 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.53□□□□□ -0.56
Col8a2P25318 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.53□□□□□ -0.56
Col8a2P25318 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.53□□□□□ -0.56
Col8a2P25318 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.53□□□□□ -0.56
Col8a2P25318 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Col8a2P25318 Gm13689-201ENSMUST00000119360 685 ntBASIC11.53□□□□□ -0.56
Col8a2P25318 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.53□□□□□ -0.56
Col8a2P25318 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.53□□□□□ -0.56
Col8a2P25318 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.53□□□□□ -0.56
Col8a2P25318 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.53□□□□□ -0.56
Col8a2P25318 Gm5186-201ENSMUST00000218781 920 ntBASIC11.53□□□□□ -0.56
Col8a2P25318 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.53□□□□□ -0.56
Col8a2P25318 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.53□□□□□ -0.56
Col8a2P25318 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Col8a2P25318 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Col8a2P25318 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Col8a2P25318 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.53□□□□□ -0.56
Col8a2P25318 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.53□□□□□ -0.56
Col8a2P25318 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Col8a2P25318 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.53□□□□□ -0.56
Col8a2P25318 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Col8a2P25318 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.53□□□□□ -0.56
Col8a2P25318 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Col8a2P25318 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Col8a2P25318 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.52□□□□□ -0.56
Col8a2P25318 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col8a2P25318 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col8a2P25318 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Col8a2P25318 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col8a2P25318 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col8a2P25318 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.52□□□□□ -0.56
Col8a2P25318 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col8a2P25318 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Col8a2P25318 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms