Protein–RNA interactions for Protein: P25233

Ndn, Necdin, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NdnP25233 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NdnP25233 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NdnP25233 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NdnP25233 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NdnP25233 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.09□□□□□ -0.63
NdnP25233 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.09□□□□□ -0.63
NdnP25233 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
NdnP25233 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
NdnP25233 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
NdnP25233 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.09□□□□□ -0.63
NdnP25233 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NdnP25233 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NdnP25233 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NdnP25233 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
NdnP25233 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NdnP25233 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NdnP25233 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NdnP25233 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
NdnP25233 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
NdnP25233 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.08□□□□□ -0.63
NdnP25233 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NdnP25233 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
NdnP25233 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NdnP25233 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.08□□□□□ -0.64
NdnP25233 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
NdnP25233 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.08□□□□□ -0.64
NdnP25233 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
NdnP25233 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
NdnP25233 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
NdnP25233 Gm27704-201ENSMUST00000185094 107 ntBASIC11.08□□□□□ -0.64
NdnP25233 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.08□□□□□ -0.64
NdnP25233 Gm33142-201ENSMUST00000193913 867 ntBASIC11.08□□□□□ -0.64
NdnP25233 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
NdnP25233 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
NdnP25233 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
NdnP25233 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.08□□□□□ -0.64
NdnP25233 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.08□□□□□ -0.64
NdnP25233 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
NdnP25233 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.08□□□□□ -0.64
NdnP25233 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
NdnP25233 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NdnP25233 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
NdnP25233 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
NdnP25233 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
NdnP25233 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
NdnP25233 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
NdnP25233 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.07□□□□□ -0.64
NdnP25233 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
NdnP25233 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
NdnP25233 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.07□□□□□ -0.64
NdnP25233 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NdnP25233 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms