Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.59□□□□□ -0.39
Cbx3P23198 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.59□□□□□ -0.39
Cbx3P23198 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.59□□□□□ -0.39
Cbx3P23198 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Cbx3P23198 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.59□□□□□ -0.39
Cbx3P23198 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cbx3P23198 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cbx3P23198 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cbx3P23198 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cbx3P23198 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cbx3P23198 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cbx3P23198 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cbx3P23198 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cbx3P23198 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.58□□□□□ -0.4
Cbx3P23198 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cbx3P23198 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.58□□□□□ -0.4
Cbx3P23198 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.58□□□□□ -0.4
Cbx3P23198 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Cbx3P23198 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Cbx3P23198 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Cbx3P23198 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.58□□□□□ -0.4
Cbx3P23198 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.58□□□□□ -0.4
Cbx3P23198 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.58□□□□□ -0.4
Cbx3P23198 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Cbx3P23198 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cbx3P23198 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cbx3P23198 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Cbx3P23198 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cbx3P23198 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
Cbx3P23198 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Cbx3P23198 Gm12644-201ENSMUST00000119935 606 ntBASIC12.57□□□□□ -0.4
Cbx3P23198 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Gm27357-201ENSMUST00000183754 135 ntBASIC12.57□□□□□ -0.4
Cbx3P23198 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.57□□□□□ -0.4
Cbx3P23198 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.57□□□□□ -0.4
Cbx3P23198 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.57□□□□□ -0.4
Cbx3P23198 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Cbx3P23198 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.57□□□□□ -0.4
Cbx3P23198 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.57□□□□□ -0.4
Cbx3P23198 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.57□□□□□ -0.4
Cbx3P23198 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.57□□□□□ -0.4
Cbx3P23198 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cbx3P23198 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.57□□□□□ -0.4
Cbx3P23198 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms