Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fv4P11370 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Fv4P11370 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fv4P11370 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fv4P11370 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fv4P11370 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Fv4P11370 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Fv4P11370 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.39□□□□□ -0.27
Fv4P11370 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Fv4P11370 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.38□□□□□ -0.27
Fv4P11370 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Fv4P11370 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.38□□□□□ -0.27
Fv4P11370 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Gm14822-201ENSMUST00000122247 291 ntBASIC13.38□□□□□ -0.27
Fv4P11370 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.38□□□□□ -0.27
Fv4P11370 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Gm25925-201ENSMUST00000158314 306 ntBASIC13.38□□□□□ -0.27
Fv4P11370 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Gm33320-201ENSMUST00000192232 530 ntBASIC13.38□□□□□ -0.27
Fv4P11370 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.38□□□□□ -0.27
Fv4P11370 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Fv4P11370 Mir497b-201ENSMUST00000093601 125 ntBASIC13.38□□□□□ -0.27
Fv4P11370 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.38□□□□□ -0.27
Fv4P11370 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Fv4P11370 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Fv4P11370 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Fv4P11370 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.37□□□□□ -0.27
Fv4P11370 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Fv4P11370 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.37□□□□□ -0.27
Fv4P11370 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Fv4P11370 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Mir698-201ENSMUST00000102164 109 ntBASIC13.37□□□□□ -0.27
Fv4P11370 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Fv4P11370 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Fv4P11370 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Fv4P11370 Gm28630-201ENSMUST00000187806 498 ntBASIC13.37□□□□□ -0.27
Fv4P11370 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Fv4P11370 Gm5779-201ENSMUST00000218467 910 ntBASIC13.37□□□□□ -0.27
Fv4P11370 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Fv4P11370 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Fv4P11370 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Fv4P11370 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Fv4P11370 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Fv4P11370 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fv4P11370 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fv4P11370 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fv4P11370 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fv4P11370 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fv4P11370 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fv4P11370 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fv4P11370 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fv4P11370 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fv4P11370 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fv4P11370 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fv4P11370 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Fv4P11370 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Fv4P11370 Gm15653-201ENSMUST00000119247 907 ntBASIC13.36□□□□□ -0.27
Fv4P11370 Gm15693-201ENSMUST00000120470 637 ntBASIC13.36□□□□□ -0.27
Fv4P11370 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fv4P11370 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Fv4P11370 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms