Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
ApoeP08226 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ApoeP08226 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ApoeP08226 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
ApoeP08226 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ApoeP08226 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
ApoeP08226 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.08□□□□□ -0.32
ApoeP08226 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ApoeP08226 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
ApoeP08226 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.08□□□□□ -0.32
ApoeP08226 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ApoeP08226 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.08□□□□□ -0.32
ApoeP08226 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.08□□□□□ -0.32
ApoeP08226 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ApoeP08226 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
ApoeP08226 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ApoeP08226 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
ApoeP08226 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.07□□□□□ -0.32
ApoeP08226 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.07□□□□□ -0.32
ApoeP08226 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.07□□□□□ -0.32
ApoeP08226 Gm9103-201ENSMUST00000119371 405 ntBASIC13.07□□□□□ -0.32
ApoeP08226 Gm11543-201ENSMUST00000120758 370 ntBASIC13.07□□□□□ -0.32
ApoeP08226 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.07□□□□□ -0.32
ApoeP08226 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ApoeP08226 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.07□□□□□ -0.32
ApoeP08226 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ApoeP08226 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.07□□□□□ -0.32
ApoeP08226 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
ApoeP08226 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.07□□□□□ -0.32
ApoeP08226 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ApoeP08226 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.07□□□□□ -0.32
ApoeP08226 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
ApoeP08226 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
ApoeP08226 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
ApoeP08226 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ApoeP08226 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ApoeP08226 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
ApoeP08226 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Gm6973-201ENSMUST00000117080 721 ntBASIC13.06□□□□□ -0.32
ApoeP08226 Rpph1-201ENSMUST00000175096 319 ntBASIC13.06□□□□□ -0.32
ApoeP08226 Mir5131-201ENSMUST00000175426 93 ntBASIC13.06□□□□□ -0.32
ApoeP08226 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.06□□□□□ -0.32
ApoeP08226 Gm29741-201ENSMUST00000192667 421 ntBASIC13.06□□□□□ -0.32
ApoeP08226 Gm17968-201ENSMUST00000194902 784 ntBASIC13.06□□□□□ -0.32
ApoeP08226 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
ApoeP08226 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ApoeP08226 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms