Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-b1P02088 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.71□□□□□ -0.85
Hbb-b1P02088 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-b1P02088 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-b1P02088 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-b1P02088 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-b1P02088 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-b1P02088 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hbb-b1P02088 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Gm13168-201ENSMUST00000121771 632 ntBASIC9.71□□□□□ -0.86
Hbb-b1P02088 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC9.71□□□□□ -0.86
Hbb-b1P02088 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Gm6944-201ENSMUST00000182449 1006 ntBASIC9.71□□□□□ -0.86
Hbb-b1P02088 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC9.71□□□□□ -0.86
Hbb-b1P02088 Arhgef33-211ENSMUST00000225658 473 ntBASIC9.71□□□□□ -0.86
Hbb-b1P02088 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.71□□□□□ -0.86
Hbb-b1P02088 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.71□□□□□ -0.86
Hbb-b1P02088 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.71□□□□□ -0.86
Hbb-b1P02088 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Gm12497-201ENSMUST00000138778 237 ntBASIC9.7□□□□□ -0.86
Hbb-b1P02088 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC9.7□□□□□ -0.86
Hbb-b1P02088 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.7□□□□□ -0.86
Hbb-b1P02088 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Hbb-b1P02088 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hbb-b1P02088 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-b1P02088 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-b1P02088 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-b1P02088 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-b1P02088 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-b1P02088 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Hbb-b1P02088 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-b1P02088 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-b1P02088 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-b1P02088 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hbb-b1P02088 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms