Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.09□□□□□ -0.79
TcraP01849 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
TcraP01849 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.09□□□□□ -0.79
TcraP01849 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.09□□□□□ -0.79
TcraP01849 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC10.09□□□□□ -0.79
TcraP01849 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.09□□□□□ -0.79
TcraP01849 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC10.09□□□□□ -0.79
TcraP01849 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC10.09□□□□□ -0.79
TcraP01849 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC10.09□□□□□ -0.79
TcraP01849 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.09□□□□□ -0.79
TcraP01849 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC10.09□□□□□ -0.79
TcraP01849 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
TcraP01849 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.09□□□□□ -0.79
TcraP01849 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.09□□□□□ -0.79
TcraP01849 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
TcraP01849 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.09□□□□□ -0.79
TcraP01849 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
TcraP01849 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
TcraP01849 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
TcraP01849 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
TcraP01849 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.08□□□□□ -0.8
TcraP01849 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.08□□□□□ -0.8
TcraP01849 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC10.08□□□□□ -0.8
TcraP01849 Gm7153-201ENSMUST00000117092 455 ntBASIC10.08□□□□□ -0.8
TcraP01849 Gm13464-201ENSMUST00000119418 935 ntBASIC10.08□□□□□ -0.8
TcraP01849 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.08□□□□□ -0.8
TcraP01849 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
TcraP01849 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
TcraP01849 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.08□□□□□ -0.8
TcraP01849 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.08□□□□□ -0.8
TcraP01849 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC10.08□□□□□ -0.8
TcraP01849 Gm34391-201ENSMUST00000203706 907 ntBASIC10.08□□□□□ -0.8
TcraP01849 Umpk-ps-201ENSMUST00000211897 827 ntBASIC10.08□□□□□ -0.8
TcraP01849 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
TcraP01849 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
TcraP01849 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
TcraP01849 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
TcraP01849 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
TcraP01849 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
TcraP01849 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
TcraP01849 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.07□□□□□ -0.8
TcraP01849 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
TcraP01849 Gm9252-201ENSMUST00000172364 1602 ntBASIC10.07□□□□□ -0.8
TcraP01849 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
TcraP01849 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
TcraP01849 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
TcraP01849 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms