Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.52□□□□□ -0.25
Npc1O35604 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Npc1O35604 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Npc1O35604 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Npc1O35604 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.51□□□□□ -0.25
Npc1O35604 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.51□□□□□ -0.25
Npc1O35604 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Npc1O35604 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.51□□□□□ -0.25
Npc1O35604 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Npc1O35604 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.51□□□□□ -0.25
Npc1O35604 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.51□□□□□ -0.25
Npc1O35604 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.51□□□□□ -0.25
Npc1O35604 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Npc1O35604 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.51□□□□□ -0.25
Npc1O35604 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.51□□□□□ -0.25
Npc1O35604 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Npc1O35604 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Npc1O35604 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Npc1O35604 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.51□□□□□ -0.25
Npc1O35604 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Npc1O35604 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.51□□□□□ -0.25
Npc1O35604 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Npc1O35604 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Npc1O35604 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npc1O35604 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.5□□□□□ -0.25
Npc1O35604 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Npc1O35604 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.5□□□□□ -0.25
Npc1O35604 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Npc1O35604 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Npc1O35604 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Npc1O35604 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Npc1O35604 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Npc1O35604 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.5□□□□□ -0.25
Npc1O35604 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Npc1O35604 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Npc1O35604 Gm9797-201ENSMUST00000052902 613 ntBASIC13.5□□□□□ -0.25
Npc1O35604 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Npc1O35604 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Npc1O35604 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.5□□□□□ -0.25
Npc1O35604 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.5□□□□□ -0.25
Npc1O35604 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Npc1O35604 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npc1O35604 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npc1O35604 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms