Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gm2810-201ENSMUST00000118681 990 ntBASIC13.63□□□□□ -0.23
Slc1a6O35544 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.63□□□□□ -0.23
Slc1a6O35544 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.63□□□□□ -0.23
Slc1a6O35544 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Slc1a6O35544 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.63□□□□□ -0.23
Slc1a6O35544 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Slc1a6O35544 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.63□□□□□ -0.23
Slc1a6O35544 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc1a6O35544 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc1a6O35544 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.63□□□□□ -0.23
Slc1a6O35544 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.63□□□□□ -0.23
Slc1a6O35544 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Slc1a6O35544 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc1a6O35544 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc1a6O35544 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc1a6O35544 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc1a6O35544 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.63□□□□□ -0.23
Slc1a6O35544 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Slc1a6O35544 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc1a6O35544 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Slc1a6O35544 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.62□□□□□ -0.23
Slc1a6O35544 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Slc1a6O35544 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Slc1a6O35544 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.62□□□□□ -0.23
Slc1a6O35544 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.62□□□□□ -0.23
Slc1a6O35544 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Slc1a6O35544 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Slc1a6O35544 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.62□□□□□ -0.23
Slc1a6O35544 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.62□□□□□ -0.23
Slc1a6O35544 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Slc1a6O35544 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc1a6O35544 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Slc1a6O35544 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.61□□□□□ -0.23
Slc1a6O35544 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Gm13823-201ENSMUST00000119930 345 ntBASIC13.61□□□□□ -0.23
Slc1a6O35544 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.61□□□□□ -0.23
Slc1a6O35544 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc1a6O35544 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Slc1a6O35544 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc1a6O35544 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Gm18027-201ENSMUST00000218947 619 ntBASIC13.61□□□□□ -0.23
Slc1a6O35544 Psmb5-202ENSMUST00000227257 622 ntBASIC13.61□□□□□ -0.23
Slc1a6O35544 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.61□□□□□ -0.23
Slc1a6O35544 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Slc1a6O35544 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc1a6O35544 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Slc1a6O35544 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Slc1a6O35544 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Slc1a6O35544 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc1a6O35544 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc1a6O35544 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc1a6O35544 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc1a6O35544 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc1a6O35544 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc1a6O35544 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc1a6O35544 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms