Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col6a3E9PWQ3 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Gm44069-201ENSMUST00000204898 506 ntBASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Gm11450-201ENSMUST00000121144 333 ntBASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.47□□□□□ -0.25
Col6a3E9PWQ3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 Gm37246-201ENSMUST00000192665 835 ntBASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 Mir7076-201ENSMUST00000183519 74 ntBASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Col6a3E9PWQ3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a3E9PWQ3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a3E9PWQ3 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.46□□□□□ -0.26
Col6a3E9PWQ3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Col6a3E9PWQ3 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a3E9PWQ3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a3E9PWQ3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col6a3E9PWQ3 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Gm16372-201ENSMUST00000073088 450 ntBASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Mir6998-201ENSMUST00000183343 64 ntBASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Gm44651-201ENSMUST00000207343 372 ntBASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col6a3E9PWQ3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms