Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.9□□□□□ -0.18
Gm28043E0CXC2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm28043E0CXC2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm28043E0CXC2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm28043E0CXC2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm28043E0CXC2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm28043E0CXC2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Gm28043E0CXC2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Gm28043E0CXC2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.9□□□□□ -0.19
Gm28043E0CXC2 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.9□□□□□ -0.19
Gm28043E0CXC2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Gm14042-201ENSMUST00000120139 833 ntBASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Gm28043E0CXC2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Gm23935-201ENSMUST00000102303 57 ntBASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Gm24270-201ENSMUST00000102326 57 ntBASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Gm24245-201ENSMUST00000157318 57 ntBASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Gm43575-201ENSMUST00000196420 516 ntBASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Gm44335-201ENSMUST00000196879 141 ntBASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Gm44297-201ENSMUST00000198304 141 ntBASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Gm44346-201ENSMUST00000198851 141 ntBASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Gm43125-201ENSMUST00000201724 730 ntBASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gm28043E0CXC2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms