Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Atg4a-psA0A0G2JFS9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm16215-201ENSMUST00000161990 637 ntBASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm42612-201ENSMUST00000197986 623 ntBASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Gm43170-201ENSMUST00000199827 612 ntBASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Atg4a-psA0A0G2JFS9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.77■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Atg4a-psA0A0G2JFS9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.77■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Acot6-202ENSMUST00000222921 3622 ntBASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm14057-201ENSMUST00000120631 482 ntBASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atg4a-psA0A0G2JFS9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms