Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav18A0A075B656 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav18A0A075B656 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav18A0A075B656 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav18A0A075B656 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.35□□□□□ -0.59
Trav18A0A075B656 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav18A0A075B656 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav18A0A075B656 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav18A0A075B656 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav18A0A075B656 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav18A0A075B656 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav18A0A075B656 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav18A0A075B656 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav18A0A075B656 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav18A0A075B656 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.34□□□□□ -0.59
Trav18A0A075B656 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Mir1895-201ENSMUST00000122615 79 ntBASIC11.34□□□□□ -0.59
Trav18A0A075B656 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.34□□□□□ -0.59
Trav18A0A075B656 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.34□□□□□ -0.59
Trav18A0A075B656 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav18A0A075B656 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
Trav18A0A075B656 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav18A0A075B656 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav18A0A075B656 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.33□□□□□ -0.6
Trav18A0A075B656 Gm9824-201ENSMUST00000178707 561 ntBASIC11.33□□□□□ -0.6
Trav18A0A075B656 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Gm18027-201ENSMUST00000218947 619 ntBASIC11.33□□□□□ -0.6
Trav18A0A075B656 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.33□□□□□ -0.6
Trav18A0A075B656 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.33□□□□□ -0.6
Trav18A0A075B656 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms