Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.2□□□□□ -0.14
Speer3W4VSP1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.2□□□□□ -0.14
Speer3W4VSP1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.2□□□□□ -0.14
Speer3W4VSP1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Speer3W4VSP1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.19□□□□□ -0.14
Speer3W4VSP1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC14.19□□□□□ -0.14
Speer3W4VSP1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.19□□□□□ -0.14
Speer3W4VSP1 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC14.19□□□□□ -0.14
Speer3W4VSP1 CT009495.1-201ENSMUST00000224221 862 ntBASIC14.19□□□□□ -0.14
Speer3W4VSP1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Speer3W4VSP1 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Speer3W4VSP1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.18□□□□□ -0.14
Speer3W4VSP1 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.18□□□□□ -0.14
Speer3W4VSP1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Gm38216-201ENSMUST00000194872 1214 ntBASIC14.18□□□□□ -0.14
Speer3W4VSP1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.18□□□□□ -0.14
Speer3W4VSP1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.18□□□□□ -0.14
Speer3W4VSP1 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.18□□□□□ -0.14
Speer3W4VSP1 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.18□□□□□ -0.14
Speer3W4VSP1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Speer3W4VSP1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms