Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cx3cr1Q9Z0D9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm9385-201ENSMUST00000117563 472 ntBASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm7461-201ENSMUST00000058918 827 ntBASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cx3cr1Q9Z0D9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Cx3cr1Q9Z0D9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cx3cr1Q9Z0D9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cx3cr1Q9Z0D9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cx3cr1Q9Z0D9 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Cx3cr1Q9Z0D9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cx3cr1Q9Z0D9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cx3cr1Q9Z0D9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cx3cr1Q9Z0D9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cx3cr1Q9Z0D9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.7□□□□□ -0.54
Cx3cr1Q9Z0D9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cx3cr1Q9Z0D9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Cx3cr1Q9Z0D9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms