Protein–RNA interactions for Protein: Q9WV80

Snx1, Sorting nexin-1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx1Q9WV80 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snx1Q9WV80 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Snx1Q9WV80 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.35□□□□□ -0.11
Snx1Q9WV80 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.35□□□□□ -0.11
Snx1Q9WV80 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snx1Q9WV80 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.34□□□□□ -0.11
Snx1Q9WV80 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Gm6973-201ENSMUST00000117080 721 ntBASIC14.34□□□□□ -0.11
Snx1Q9WV80 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.34□□□□□ -0.11
Snx1Q9WV80 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.34□□□□□ -0.11
Snx1Q9WV80 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Snx1Q9WV80 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Snx1Q9WV80 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Snx1Q9WV80 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.33□□□□□ -0.11
Snx1Q9WV80 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Snx1Q9WV80 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Snx1Q9WV80 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.33□□□□□ -0.12
Snx1Q9WV80 Gm12882-201ENSMUST00000121696 517 ntBASIC14.33□□□□□ -0.12
Snx1Q9WV80 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.33□□□□□ -0.12
Snx1Q9WV80 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.33□□□□□ -0.12
Snx1Q9WV80 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snx1Q9WV80 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms