Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.71□□□□□ -0.53
Six6Q9QZ28 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Gm15565-201ENSMUST00000118890 427 ntBASIC11.71□□□□□ -0.53
Six6Q9QZ28 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six6Q9QZ28 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six6Q9QZ28 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six6Q9QZ28 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six6Q9QZ28 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Six6Q9QZ28 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Six6Q9QZ28 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Six6Q9QZ28 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.71□□□□□ -0.54
Six6Q9QZ28 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Six6Q9QZ28 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Six6Q9QZ28 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.71□□□□□ -0.54
Six6Q9QZ28 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Six6Q9QZ28 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Six6Q9QZ28 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.7□□□□□ -0.54
Six6Q9QZ28 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.7□□□□□ -0.54
Six6Q9QZ28 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Gm18246-201ENSMUST00000221023 728 ntBASIC11.7□□□□□ -0.54
Six6Q9QZ28 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Six6Q9QZ28 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six6Q9QZ28 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.69□□□□□ -0.54
Six6Q9QZ28 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.69□□□□□ -0.54
Six6Q9QZ28 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six6Q9QZ28 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six6Q9QZ28 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Six6Q9QZ28 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six6Q9QZ28 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six6Q9QZ28 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six6Q9QZ28 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Six6Q9QZ28 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms