Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rsph9Q9D9V4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rsph9Q9D9V4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rsph9Q9D9V4 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.62□□□□□ -0.23
Rsph9Q9D9V4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rsph9Q9D9V4 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Rsph9Q9D9V4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rsph9Q9D9V4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rsph9Q9D9V4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Gm12138-201ENSMUST00000122180 951 ntBASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Gm45384-201ENSMUST00000210451 277 ntBASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rsph9Q9D9V4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rsph9Q9D9V4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Gm11478-201ENSMUST00000117851 599 ntBASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Gm15240-201ENSMUST00000118156 720 ntBASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rsph9Q9D9V4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms