Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Gm12091-201ENSMUST00000146791 830 ntBASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Gm5279-201ENSMUST00000199575 745 ntBASIC13.12□□□□□ -0.31
Otud1Q9CUB6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Gm9794-201ENSMUST00000202370 423 ntBASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Thoc7-209ENSMUST00000225325 765 ntBASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Otud1Q9CUB6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Gm12490-201ENSMUST00000120255 560 ntBASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Mir6392-201ENSMUST00000184924 108 ntBASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Gm45668-201ENSMUST00000211271 493 ntBASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Gm9908-201ENSMUST00000211534 448 ntBASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.11□□□□□ -0.31
Otud1Q9CUB6 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Otud1Q9CUB6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms