Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retreg3Q9CQV4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Retreg3Q9CQV4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retreg3Q9CQV4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Gm42474-201ENSMUST00000201073 505 ntBASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Gm44607-201ENSMUST00000205611 1090 ntBASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Gm7730-201ENSMUST00000212486 454 ntBASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Gm18027-201ENSMUST00000218947 619 ntBASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retreg3Q9CQV4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Gm7488-201ENSMUST00000117148 684 ntBASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Gm25109-201ENSMUST00000122474 114 ntBASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retreg3Q9CQV4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retreg3Q9CQV4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retreg3Q9CQV4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retreg3Q9CQV4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retreg3Q9CQV4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retreg3Q9CQV4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retreg3Q9CQV4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.05□□□□□ -0.16
Retreg3Q9CQV4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retreg3Q9CQV4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retreg3Q9CQV4 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retreg3Q9CQV4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retreg3Q9CQV4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retreg3Q9CQV4 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retreg3Q9CQV4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retreg3Q9CQV4 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retreg3Q9CQV4 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms