Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AC008663.2-202ENST00000519897 1418 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
KRTAP3-3Q9BYR6 AL512310.11-201ENST00000611741 1837 ntTSL 5 BASIC10.65□□□□□ -0.71
KRTAP3-3Q9BYR6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC10.65□□□□□ -0.71
KRTAP3-3Q9BYR6 BCL11A-204ENST00000359629 2427 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
KRTAP3-3Q9BYR6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC10.65□□□□□ -0.71
KRTAP3-3Q9BYR6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
KRTAP3-3Q9BYR6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC10.65□□□□□ -0.71
KRTAP3-3Q9BYR6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC10.65□□□□□ -0.71
KRTAP3-3Q9BYR6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
KRTAP3-3Q9BYR6 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
KRTAP3-3Q9BYR6 CLVS2-202ENST00000368438 1359 ntTSL 5 BASIC10.65□□□□□ -0.71
KRTAP3-3Q9BYR6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 ELF2P3-201ENST00000445099 1506 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC073130.3-201ENST00000624389 2278 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC005332.1-201ENST00000577698 1310 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 PSMA2-201ENST00000223321 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 PRORSD1P-201ENST00000295112 541 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 PGBD4P8-201ENST00000412993 562 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AL158055.1-201ENST00000418775 586 ntTSL 3 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC012519.1-201ENST00000424588 610 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC000111.3-201ENST00000433478 193 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 LINC01985-201ENST00000450746 436 ntTSL 3 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 BX322784.1-201ENST00000455793 1077 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC018892.2-201ENST00000457656 693 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC093166.4-201ENST00000457867 318 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 CAMTA1-210ENST00000476864 714 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 IMMP1L-209ENST00000532287 685 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 LYZ-202ENST00000548839 558 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AL121839.1-201ENST00000556233 1185 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 PDLIM1P1-201ENST00000604187 969 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC012603.1-201ENST00000606424 528 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC067904.3-201ENST00000617126 261 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC112702.1-201ENST00000623712 366 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 TAF1B-211ENST00000625239 273 ntTSL 5 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC005144.1-201ENST00000637627 703 ntTSL 5 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 KRT8P33-201ENST00000508125 1423 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 OLFML3-202ENST00000369551 1934 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 AF106564.1-201ENST00000607058 2553 ntBASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-3Q9BYR6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
KRTAP3-3Q9BYR6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms