Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Gm24749-201ENSMUST00000157838 343 ntBASIC16.1■□□□□ 0.17
StrcQ8VIM6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC16.1■□□□□ 0.17
StrcQ8VIM6 AC166095.1-201ENSMUST00000223731 1241 ntBASIC16.1■□□□□ 0.17
StrcQ8VIM6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
StrcQ8VIM6 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Crry-ps-201ENSMUST00000079090 1309 ntBASIC16.09■□□□□ 0.17
StrcQ8VIM6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Gm15547-201ENSMUST00000122152 333 ntBASIC16.09■□□□□ 0.17
StrcQ8VIM6 Gm44405-201ENSMUST00000198952 126 ntBASIC16.09■□□□□ 0.17
StrcQ8VIM6 Gm10109-202ENSMUST00000206890 1211 ntBASIC16.09■□□□□ 0.17
StrcQ8VIM6 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
StrcQ8VIM6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
StrcQ8VIM6 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.08■□□□□ 0.17
StrcQ8VIM6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
StrcQ8VIM6 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
StrcQ8VIM6 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
StrcQ8VIM6 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
StrcQ8VIM6 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
StrcQ8VIM6 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC16.08■□□□□ 0.17
StrcQ8VIM6 Gm17208-201ENSMUST00000168388 535 ntBASIC16.08■□□□□ 0.17
StrcQ8VIM6 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
StrcQ8VIM6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
StrcQ8VIM6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
StrcQ8VIM6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
StrcQ8VIM6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
StrcQ8VIM6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
StrcQ8VIM6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
StrcQ8VIM6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
StrcQ8VIM6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
StrcQ8VIM6 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
StrcQ8VIM6 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.08■□□□□ 0.16
StrcQ8VIM6 Gm18734-201ENSMUST00000172937 808 ntBASIC16.08■□□□□ 0.16
StrcQ8VIM6 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC16.08■□□□□ 0.16
StrcQ8VIM6 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
StrcQ8VIM6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.08■□□□□ 0.16
StrcQ8VIM6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
StrcQ8VIM6 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
StrcQ8VIM6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Gm12502-201ENSMUST00000120197 444 ntBASIC16.07■□□□□ 0.16
StrcQ8VIM6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC16.07■□□□□ 0.16
StrcQ8VIM6 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
StrcQ8VIM6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC16.07■□□□□ 0.16
StrcQ8VIM6 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
StrcQ8VIM6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.07■□□□□ 0.16
StrcQ8VIM6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms