Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Gm27772-201ENSMUST00000184900 187 ntBASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Gm6266-201ENSMUST00000203844 806 ntBASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Gm44719-201ENSMUST00000206404 149 ntBASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.46■□□□□ 0.07
Atp2a1Q8R429 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.46■□□□□ 0.06
Atp2a1Q8R429 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Atp2a1Q8R429 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Atp2a1Q8R429 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.06
Atp2a1Q8R429 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Gm27892-201ENSMUST00000185017 106 ntBASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Gm2495-201ENSMUST00000191160 466 ntBASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Atp2a1Q8R429 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Gm26464-201ENSMUST00000157094 305 ntBASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Mir497b-201ENSMUST00000093601 125 ntBASIC15.44■□□□□ 0.06
Atp2a1Q8R429 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Atp2a1Q8R429 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms